ENSODEP00000001869 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSODEP00000001869

annotation not available (418 aa)

Predicted Functional Partners:

ENSODEP00000010090

0.995

ENSODEP00000010785

0.995

ITSN1

0.978

WAS

0.952

WASL

0.952

ENSODEP00000016752

0.949

STAM2

0.922

ENSODEP00000013822

0.922

MOB1A

0.922

EPS15L1

0.916

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001869	ENSODEP00000010090	ENSODEP00000001869	ENSODEP00000010090	annotation not available	annotation not available	0.995
ENSODEP00000001869	ENSODEP00000010785	ENSODEP00000001869	ENSODEP00000010785	annotation not available	annotation not available	0.995
ENSODEP00000001869	ENSODEP00000013822	ENSODEP00000001869	ENSODEP00000013822	annotation not available	annotation not available	0.922
ENSODEP00000001869	ENSODEP00000016752	ENSODEP00000001869	ENSODEP00000016752	annotation not available	annotation not available	0.949
ENSODEP00000001869	EPS15L1	ENSODEP00000001869	ENSODEP00000001757	annotation not available	Epidermal growth factor receptor pathway substrate 15 like 1.	0.916
ENSODEP00000001869	ITSN1	ENSODEP00000001869	ENSODEP00000004381	annotation not available	Intersectin 1.	0.978
ENSODEP00000001869	MOB1A	ENSODEP00000001869	ENSODEP00000015935	annotation not available	MOB kinase activator 1A.	0.922
ENSODEP00000001869	STAM2	ENSODEP00000001869	ENSODEP00000005757	annotation not available	Signal transducing adaptor molecule 2.	0.922
ENSODEP00000001869	WAS	ENSODEP00000001869	ENSODEP00000012575	annotation not available	WASP actin nucleation promoting factor.	0.952
ENSODEP00000001869	WASL	ENSODEP00000001869	ENSODEP00000017609	annotation not available	WASP like actin nucleation promoting factor.	0.952
ENSODEP00000010090	ENSODEP00000001869	ENSODEP00000010090	ENSODEP00000001869	annotation not available	annotation not available	0.995
ENSODEP00000010090	ENSODEP00000010785	ENSODEP00000010090	ENSODEP00000010785	annotation not available	annotation not available	0.976
ENSODEP00000010090	ENSODEP00000013822	ENSODEP00000010090	ENSODEP00000013822	annotation not available	annotation not available	0.914
ENSODEP00000010090	ENSODEP00000016752	ENSODEP00000010090	ENSODEP00000016752	annotation not available	annotation not available	0.923
ENSODEP00000010090	EPS15L1	ENSODEP00000010090	ENSODEP00000001757	annotation not available	Epidermal growth factor receptor pathway substrate 15 like 1.	0.987
ENSODEP00000010090	ITSN1	ENSODEP00000010090	ENSODEP00000004381	annotation not available	Intersectin 1.	0.922
ENSODEP00000010090	STAM2	ENSODEP00000010090	ENSODEP00000005757	annotation not available	Signal transducing adaptor molecule 2.	0.914
ENSODEP00000010090	WAS	ENSODEP00000010090	ENSODEP00000012575	annotation not available	WASP actin nucleation promoting factor.	0.986
ENSODEP00000010090	WASL	ENSODEP00000010090	ENSODEP00000017609	annotation not available	WASP like actin nucleation promoting factor.	0.986
ENSODEP00000010785	ENSODEP00000001869	ENSODEP00000010785	ENSODEP00000001869	annotation not available	annotation not available	0.995