Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001880annotation not available (169 aa)    
Predicted Functional Partners:
ENSODEP00000023057
annotation not available
   
 
 0.921
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.884
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.884
RAB14
RAB14, member RAS oncogene family.
   
 
 0.595
COG5
Component of oligomeric golgi complex 5.
   
  
 0.568
PI4KB
Phosphatidylinositol 4-kinase beta.
      
 0.532
STX5
Syntaxin 5.
      
 0.531
FAM126A
Family with sequence similarity 126 member A.
      
 0.527
PI4K2B
Phosphatidylinositol 4-kinase type 2 beta.
    
 
 0.463
PI4K2A
Phosphatidylinositol 4-kinase type 2 alpha.
    
 
 0.463
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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