ENSODEP00000001883 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSODEP00000001883

annotation not available (345 aa)

Predicted Functional Partners:

CTU2

0.918

FTSJ3

0.904

URM1

0.901

UQCRFS1

0.900

GMPS

0.891

RBM34

0.891

TRMT6

0.887

METTL1

0.886

MOCS3

0.883

DDX56

0.881

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTU2	ENSODEP00000001883	ENSODEP00000005413	ENSODEP00000001883	Cytosolic thiouridylase subunit 2.	annotation not available	0.918
CTU2	MOCS3	ENSODEP00000005413	ENSODEP00000025981	Cytosolic thiouridylase subunit 2.	Molybdenum cofactor synthesis 3.	0.560
CTU2	URM1	ENSODEP00000005413	ENSODEP00000023616	Cytosolic thiouridylase subunit 2.	Ubiquitin related modifier 1.	0.825
DDX56	ENSODEP00000001883	ENSODEP00000020075	ENSODEP00000001883	DEAD-box helicase 56.	annotation not available	0.881
DDX56	FTSJ3	ENSODEP00000020075	ENSODEP00000010965	DEAD-box helicase 56.	FtsJ RNA 2'-O-methyltransferase 3.	0.968
DDX56	GMPS	ENSODEP00000020075	ENSODEP00000006764	DEAD-box helicase 56.	Guanine monophosphate synthase.	0.891
DDX56	METTL1	ENSODEP00000020075	ENSODEP00000002313	DEAD-box helicase 56.	Methyltransferase like 1.	0.901
DDX56	RBM34	ENSODEP00000020075	ENSODEP00000008220	DEAD-box helicase 56.	RNA binding motif protein 34.	0.972
DDX56	TRMT6	ENSODEP00000020075	ENSODEP00000007586	DEAD-box helicase 56.	tRNA methyltransferase 6.	0.898
ENSODEP00000001883	CTU2	ENSODEP00000001883	ENSODEP00000005413	annotation not available	Cytosolic thiouridylase subunit 2.	0.918
ENSODEP00000001883	DDX56	ENSODEP00000001883	ENSODEP00000020075	annotation not available	DEAD-box helicase 56.	0.881
ENSODEP00000001883	FTSJ3	ENSODEP00000001883	ENSODEP00000010965	annotation not available	FtsJ RNA 2'-O-methyltransferase 3.	0.904
ENSODEP00000001883	GMPS	ENSODEP00000001883	ENSODEP00000006764	annotation not available	Guanine monophosphate synthase.	0.891
ENSODEP00000001883	METTL1	ENSODEP00000001883	ENSODEP00000002313	annotation not available	Methyltransferase like 1.	0.886
ENSODEP00000001883	MOCS3	ENSODEP00000001883	ENSODEP00000025981	annotation not available	Molybdenum cofactor synthesis 3.	0.883
ENSODEP00000001883	RBM34	ENSODEP00000001883	ENSODEP00000008220	annotation not available	RNA binding motif protein 34.	0.891
ENSODEP00000001883	TRMT6	ENSODEP00000001883	ENSODEP00000007586	annotation not available	tRNA methyltransferase 6.	0.887
ENSODEP00000001883	UQCRFS1	ENSODEP00000001883	ENSODEP00000019848	annotation not available	Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.	0.900
ENSODEP00000001883	URM1	ENSODEP00000001883	ENSODEP00000023616	annotation not available	Ubiquitin related modifier 1.	0.901
FTSJ3	DDX56	ENSODEP00000010965	ENSODEP00000020075	FtsJ RNA 2'-O-methyltransferase 3.	DEAD-box helicase 56.	0.968