STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCN3Cellular communication network factor 3. (351 aa)    
Predicted Functional Partners:
ENSODEP00000024498
annotation not available
    
   0.703
ZWINT
ZW10 interacting kinetochore protein.
    
   0.643
NFKB2
Nuclear factor kappa B subunit 2.
    
   0.634
SPARC
Secreted protein acidic and cysteine rich.
      
 0.582
PLAG1
PLAG1 zinc finger.
      
 0.555
IGFBP7
Insulin like growth factor binding protein 7.
   
  
 0.553
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
  0.550
ENSODEP00000011272
annotation not available
     
  0.550
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.550
SYT12
Synaptotagmin 12.
      
 0.546
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.