STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCN3Cellular communication network factor 3. (351 aa)    
Predicted Functional Partners:
NOTCH1
Notch receptor 1.
    
 
 0.572
ZWINT
ZW10 interacting kinetochore protein.
    
   0.539
PLAG1
PLAG1 zinc finger.
      
 0.536
ENSODEP00000024498
annotation not available
    
   0.534
TRHR
Thyrotropin releasing hormone receptor.
      
 0.529
PENK
Proenkephalin.
      
 0.523
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
      
 0.519
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
      
 0.502
LYN
LYN proto-oncogene, Src family tyrosine kinase.
      
 0.477
CALB1
Calbindin 1.
      
 0.459
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.