STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001903annotation not available (371 aa)    
Predicted Functional Partners:
PLCE1
Phospholipase C epsilon 1.
     
 0.946
INPP5J
Inositol polyphosphate-5-phosphatase J.
     
 0.943
ITPKB
Inositol-trisphosphate 3-kinase B.
     
 0.938
INPP5K
Inositol polyphosphate-5-phosphatase K.
     
 0.935
ITPKC
Inositol-trisphosphate 3-kinase C.
     
 0.924
PLCB3
Phospholipase C beta 3.
   
 
 0.924
ITPKA
Inositol-trisphosphate 3-kinase A.
     
 0.924
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
     
 0.920
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.920
PLCH2
Phospholipase C eta 2.
     
 0.912
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.