STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001904annotation not available (276 aa)    
Predicted Functional Partners:
HCRT
Hypocretin neuropeptide precursor.
    
 0.992
GNG2
G protein subunit gamma 2.
    
  0.964
GNB4
G protein subunit beta 4.
    
 0.946
ENSODEP00000009331
annotation not available
    
 0.946
ENSODEP00000012921
annotation not available
    
 0.946
GNB2
G protein subunit beta 2.
    
 0.944
GNG11
G protein subunit gamma 11.
   
 0.942
GNGT1
G protein subunit gamma transducin 1.
   
 0.942
GNG4
G protein subunit gamma 4.
    
  0.942
GNB3
G protein subunit beta 3.
    
 0.918
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.