STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001905annotation not available (237 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 0.874
CST3
Cystatin C.
   
 
 0.852
APLP2
Amyloid beta precursor like protein 2.
   
 0.798
APLP1
Amyloid beta precursor like protein 1.
   
 0.707
TMEM59L
Transmembrane protein 59 like.
   
   0.679
ENSODEP00000016752
annotation not available
    
   0.658
ENSODEP00000001031
annotation not available
   
 
 0.615
ENSODEP00000008043
annotation not available
   
 
 0.615
ENSODEP00000018533
annotation not available
   
 
 0.615
ACTG2
Actin gamma 2, smooth muscle.
   
 
 0.612
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.