STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL34Mitochondrial ribosomal protein L34. (86 aa)    
Predicted Functional Partners:
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.986
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.982
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.982
MRPS15
Mitochondrial ribosomal protein S15.
   
 
 0.979
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.974
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.973
ENSODEP00000025023
annotation not available
   
 
 0.973
TP53I13
Tumor protein p53 inducible protein 13.
   
 
 0.969
MRPS12
Mitochondrial ribosomal protein S12.
   
 
 0.968
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.968
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.