Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLCN5Chloride voltage-gated channel 5. (816 aa)    
Predicted Functional Partners:
CLCN3
Chloride voltage-gated channel 3.
   
  0.999
CLCN4
Chloride voltage-gated channel 4.
   
  0.997
WWC3
WWC family member 3.
   
  0.954
ENSODEP00000002201
annotation not available
    
 
 0.912
ENSODEP00000025692
annotation not available
    
 
 0.912
ENSODEP00000019474
annotation not available
    
 0.884
ENSODEP00000002386
annotation not available
    
 
 0.821
ENSODEP00000004933
annotation not available
    
 
 0.821
ENSODEP00000015519
annotation not available
    
 
 0.821
FRMD6
FERM domain containing 6.
     
 0.815
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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