ENSODEP00000001916 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSODEP00000001916

annotation not available (111 aa)

Predicted Functional Partners:

GFER

0.983

TIMM13

0.949

ENSODEP00000008057

0.939

ENSODEP00000025811

0.939

ENSODEP00000026704

0.939

TIMM10

0.927

ENSODEP00000020238

0.880

LOC101577103

0.880

ENSODEP00000026755

0.880

ENSODEP00000013617

0.857

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001916	ENSODEP00000008057	ENSODEP00000001916	ENSODEP00000008057	annotation not available	annotation not available	0.939
ENSODEP00000001916	ENSODEP00000013617	ENSODEP00000001916	ENSODEP00000013617	annotation not available	annotation not available	0.857
ENSODEP00000001916	ENSODEP00000020238	ENSODEP00000001916	ENSODEP00000020238	annotation not available	annotation not available	0.880
ENSODEP00000001916	ENSODEP00000025811	ENSODEP00000001916	ENSODEP00000025811	annotation not available	annotation not available	0.939
ENSODEP00000001916	ENSODEP00000026704	ENSODEP00000001916	ENSODEP00000026704	annotation not available	annotation not available	0.939
ENSODEP00000001916	ENSODEP00000026755	ENSODEP00000001916	ENSODEP00000026755	annotation not available	annotation not available	0.880
ENSODEP00000001916	GFER	ENSODEP00000001916	ENSODEP00000019569	annotation not available	Growth factor, augmenter of liver regeneration.	0.983
ENSODEP00000001916	LOC101577103	ENSODEP00000001916	ENSODEP00000026036	annotation not available	annotation not available	0.880
ENSODEP00000001916	TIMM10	ENSODEP00000001916	ENSODEP00000016251	annotation not available	Translocase of inner mitochondrial membrane 10.	0.927
ENSODEP00000001916	TIMM13	ENSODEP00000001916	ENSODEP00000019547	annotation not available	Translocase of inner mitochondrial membrane 13.	0.949
ENSODEP00000008057	ENSODEP00000001916	ENSODEP00000008057	ENSODEP00000001916	annotation not available	annotation not available	0.939
ENSODEP00000008057	ENSODEP00000013617	ENSODEP00000008057	ENSODEP00000013617	annotation not available	annotation not available	0.493
ENSODEP00000008057	ENSODEP00000020238	ENSODEP00000008057	ENSODEP00000020238	annotation not available	annotation not available	0.493
ENSODEP00000008057	ENSODEP00000026755	ENSODEP00000008057	ENSODEP00000026755	annotation not available	annotation not available	0.493
ENSODEP00000008057	GFER	ENSODEP00000008057	ENSODEP00000019569	annotation not available	Growth factor, augmenter of liver regeneration.	0.803
ENSODEP00000008057	LOC101577103	ENSODEP00000008057	ENSODEP00000026036	annotation not available	annotation not available	0.493
ENSODEP00000008057	TIMM10	ENSODEP00000008057	ENSODEP00000016251	annotation not available	Translocase of inner mitochondrial membrane 10.	0.776
ENSODEP00000008057	TIMM13	ENSODEP00000008057	ENSODEP00000019547	annotation not available	Translocase of inner mitochondrial membrane 13.	0.745
ENSODEP00000013617	ENSODEP00000001916	ENSODEP00000013617	ENSODEP00000001916	annotation not available	annotation not available	0.857
ENSODEP00000013617	ENSODEP00000008057	ENSODEP00000013617	ENSODEP00000008057	annotation not available	annotation not available	0.493