Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001916annotation not available (111 aa)    
Predicted Functional Partners:
GFER
Growth factor, augmenter of liver regeneration.
    
 0.965
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.931
Aifm1
annotation not available
    
 
 0.917
TIMM13
Translocase of inner mitochondrial membrane 13.
   
 0.916
ENSODEP00000008057
annotation not available
   
 0.880
ENSODEP00000025811
annotation not available
   
 0.880
ENSODEP00000026704
annotation not available
   
 0.880
ENSODEP00000025643
annotation not available
   
 0.876
NDUFS5
NADH:ubiquinone oxidoreductase subunit S5.
    
 
 0.875
ENSODEP00000020238
annotation not available
   
 0.841
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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