STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001920annotation not available (528 aa)    
Predicted Functional Partners:
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.963
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.959
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.958
ENSODEP00000006187
annotation not available
    
 0.893
ENSODEP00000008349
annotation not available
    
 0.891
SIGLEC1
Sialic acid binding Ig like lectin 1.
   
 0.836
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.830
TYROBP
TYRO protein tyrosine kinase binding protein.
   
 0.828
NCAM1
Neural cell adhesion molecule 1.
    
 0.773
NTNG1
Netrin G1.
    
 0.770
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.