Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001926annotation not available (592 aa)    
Predicted Functional Partners:
ABCC2
ATP binding cassette subfamily C member 2.
  
 0.981
ABCG5
ATP binding cassette subfamily G member 5.
   
 0.958
ABCG4
ATP binding cassette subfamily G member 4.
     
 0.880
ABCC1
ATP binding cassette subfamily C member 1.
   
 0.877
ABCG1
ATP binding cassette subfamily G member 1.
     
 0.875
ABCC3
ATP binding cassette subfamily C member 3.
   
 0.869
ABCC6
ATP binding cassette subfamily C member 6.
   
 0.840
CFTR
CF transmembrane conductance regulator.
   
 0.826
ENSODEP00000004585
annotation not available
    
 
 0.811
ENSODEP00000005467
annotation not available
    
 
 0.811
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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