ENSODEP00000001928 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

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[Homology]

Score

ENSODEP00000001928

annotation not available (245 aa)

Predicted Functional Partners:

CAPZB

0.998

ENSODEP00000003330

0.981

ENSODEP00000009689

0.981

ENSODEP00000026661

0.981

ENSODEP00000022018

0.961

CAPZA3

0.936

DCTN2

0.902

Dctn1

0.892

DCTN4

0.890

ACTR1A

0.886

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTR1A	CAPZA3	ENSODEP00000011270	ENSODEP00000026330	Actin related protein 1A.	Capping actin protein of muscle Z-line subunit alpha 3.	0.881
ACTR1A	CAPZB	ENSODEP00000011270	ENSODEP00000022545	Actin related protein 1A.	Capping actin protein of muscle Z-line subunit beta.	0.975
ACTR1A	DCTN2	ENSODEP00000011270	ENSODEP00000002369	Actin related protein 1A.	Dynactin subunit 2.	0.999
ACTR1A	DCTN4	ENSODEP00000011270	ENSODEP00000007178	Actin related protein 1A.	Dynactin subunit 4.	0.998
ACTR1A	Dctn1	ENSODEP00000011270	ENSODEP00000013543	Actin related protein 1A.	Dynactin subunit 1.	0.999
ACTR1A	ENSODEP00000001928	ENSODEP00000011270	ENSODEP00000001928	Actin related protein 1A.	annotation not available	0.886
ACTR1A	ENSODEP00000003330	ENSODEP00000011270	ENSODEP00000003330	Actin related protein 1A.	annotation not available	0.798
ACTR1A	ENSODEP00000009689	ENSODEP00000011270	ENSODEP00000009689	Actin related protein 1A.	annotation not available	0.798
ACTR1A	ENSODEP00000022018	ENSODEP00000011270	ENSODEP00000022018	Actin related protein 1A.	annotation not available	0.798
ACTR1A	ENSODEP00000026661	ENSODEP00000011270	ENSODEP00000026661	Actin related protein 1A.	annotation not available	0.798
CAPZA3	ACTR1A	ENSODEP00000026330	ENSODEP00000011270	Capping actin protein of muscle Z-line subunit alpha 3.	Actin related protein 1A.	0.881
CAPZA3	CAPZB	ENSODEP00000026330	ENSODEP00000022545	Capping actin protein of muscle Z-line subunit alpha 3.	Capping actin protein of muscle Z-line subunit beta.	0.998
CAPZA3	DCTN2	ENSODEP00000026330	ENSODEP00000002369	Capping actin protein of muscle Z-line subunit alpha 3.	Dynactin subunit 2.	0.893
CAPZA3	DCTN4	ENSODEP00000026330	ENSODEP00000007178	Capping actin protein of muscle Z-line subunit alpha 3.	Dynactin subunit 4.	0.890
CAPZA3	Dctn1	ENSODEP00000026330	ENSODEP00000013543	Capping actin protein of muscle Z-line subunit alpha 3.	Dynactin subunit 1.	0.880
CAPZA3	ENSODEP00000001928	ENSODEP00000026330	ENSODEP00000001928	Capping actin protein of muscle Z-line subunit alpha 3.	annotation not available	0.936
CAPZA3	ENSODEP00000003330	ENSODEP00000026330	ENSODEP00000003330	Capping actin protein of muscle Z-line subunit alpha 3.	annotation not available	0.986
CAPZA3	ENSODEP00000009689	ENSODEP00000026330	ENSODEP00000009689	Capping actin protein of muscle Z-line subunit alpha 3.	annotation not available	0.986
CAPZA3	ENSODEP00000022018	ENSODEP00000026330	ENSODEP00000022018	Capping actin protein of muscle Z-line subunit alpha 3.	annotation not available	0.971
CAPZA3	ENSODEP00000026661	ENSODEP00000026330	ENSODEP00000026661	Capping actin protein of muscle Z-line subunit alpha 3.	annotation not available	0.986