STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMBNAmeloblastin. (423 aa)    
Predicted Functional Partners:
KDM6A
Lysine demethylase 6A.
   
 0.953
KDM6B
Lysine demethylase 6B.
   
 0.953
ENSODEP00000006088
annotation not available
    
 0.939
CDYL
Chromodomain Y like.
   
 0.936
CDYL2
Chromodomain Y like 2.
   
 0.936
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.929
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.928
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.927
WDR82
WD repeat domain 82.
   
 0.920
ENSODEP00000014132
annotation not available
    
 0.917
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.