Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMBNAmeloblastin. (423 aa)    
Predicted Functional Partners:
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
 0.937
ENAM
Enamelin.
  
  
 0.918
AMTN
Amelotin.
  
   
 0.917
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
    
 0.858
AMELX
Amelogenin X-linked.
    
 
 0.849
AHSG
Alpha 2-HS glycoprotein.
    
 0.842
BGN
Biglycan.
    
 
 0.818
KDM6A
Lysine demethylase 6A.
   
 0.812
KDM6B
Lysine demethylase 6B.
   
 0.812
TP63
Tumor protein p63.
    
  0.808
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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