Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFRALGDNF family receptor alpha like. (386 aa)    
Predicted Functional Partners:
RET
Ret proto-oncogene.
    
 0.978
NRTN
Neurturin.
    
 0.940
GDNF
Glial cell derived neurotrophic factor.
    
 0.914
FGFR1
Fibroblast growth factor receptor 1.
    
 0.870
STIL
STIL centriolar assembly protein.
    
 0.870
FGFR4
Fibroblast growth factor receptor 4.
    
 0.870
FGFRL1
Fibroblast growth factor receptor like 1.
    
 0.870
ENSODEP00000017080
annotation not available
    
 0.870
FGFR2
Fibroblast growth factor receptor 2.
    
 0.870
ARTN
Artemin.
    
 0.838
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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