STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain containing 1. (701 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
    
 0.776
SUSD2
Sushi domain containing 2.
      
 0.738
TNR
Tenascin R.
    
 0.731
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.720
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.719
Tonsl
Tonsoku like, DNA repair protein.
   
 0.707
CNTN3
Contactin 3.
    
 0.694
AP5M1
Adaptor related protein complex 5 subunit mu 1.
    
 
 0.690
ENSODEP00000001869
annotation not available
    
 0.686
CCDC115
Coiled-coil domain containing 115.
    
 
 0.685
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.