PRRG3 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PRRG3

Proline rich and Gla domain 3. (230 aa)

Predicted Functional Partners:

FGF23

0.736

NEUROD2

0.736

NEDD4L

0.675

NDFIP1

0.667

NEDD4

0.665

ENSODEP00000021282

0.477

NDFIP2

0.469

LRRC52

0.412

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000021282	LRRC52	ENSODEP00000021282	ENSODEP00000010153	annotation not available	Leucine rich repeat containing 52.	0.461
ENSODEP00000021282	PRRG3	ENSODEP00000021282	ENSODEP00000001941	annotation not available	Proline rich and Gla domain 3.	0.477
FGF23	PRRG3	ENSODEP00000003440	ENSODEP00000001941	Fibroblast growth factor 23.	Proline rich and Gla domain 3.	0.736
LRRC52	ENSODEP00000021282	ENSODEP00000010153	ENSODEP00000021282	Leucine rich repeat containing 52.	annotation not available	0.461
LRRC52	PRRG3	ENSODEP00000010153	ENSODEP00000001941	Leucine rich repeat containing 52.	Proline rich and Gla domain 3.	0.412
NDFIP1	NDFIP2	ENSODEP00000016960	ENSODEP00000007385	Nedd4 family interacting protein 1.	Nedd4 family interacting protein 2.	0.487
NDFIP1	NEDD4	ENSODEP00000016960	ENSODEP00000009108	Nedd4 family interacting protein 1.	NEDD4 E3 ubiquitin protein ligase.	0.917
NDFIP1	NEDD4L	ENSODEP00000016960	ENSODEP00000025266	Nedd4 family interacting protein 1.	NEDD4 like E3 ubiquitin protein ligase.	0.871
NDFIP1	PRRG3	ENSODEP00000016960	ENSODEP00000001941	Nedd4 family interacting protein 1.	Proline rich and Gla domain 3.	0.667
NDFIP2	NDFIP1	ENSODEP00000007385	ENSODEP00000016960	Nedd4 family interacting protein 2.	Nedd4 family interacting protein 1.	0.487
NDFIP2	NEDD4	ENSODEP00000007385	ENSODEP00000009108	Nedd4 family interacting protein 2.	NEDD4 E3 ubiquitin protein ligase.	0.955
NDFIP2	NEDD4L	ENSODEP00000007385	ENSODEP00000025266	Nedd4 family interacting protein 2.	NEDD4 like E3 ubiquitin protein ligase.	0.901
NDFIP2	PRRG3	ENSODEP00000007385	ENSODEP00000001941	Nedd4 family interacting protein 2.	Proline rich and Gla domain 3.	0.469
NEDD4	NDFIP1	ENSODEP00000009108	ENSODEP00000016960	NEDD4 E3 ubiquitin protein ligase.	Nedd4 family interacting protein 1.	0.917
NEDD4	NDFIP2	ENSODEP00000009108	ENSODEP00000007385	NEDD4 E3 ubiquitin protein ligase.	Nedd4 family interacting protein 2.	0.955
NEDD4	NEDD4L	ENSODEP00000009108	ENSODEP00000025266	NEDD4 E3 ubiquitin protein ligase.	NEDD4 like E3 ubiquitin protein ligase.	0.923
NEDD4	PRRG3	ENSODEP00000009108	ENSODEP00000001941	NEDD4 E3 ubiquitin protein ligase.	Proline rich and Gla domain 3.	0.665
NEDD4L	NDFIP1	ENSODEP00000025266	ENSODEP00000016960	NEDD4 like E3 ubiquitin protein ligase.	Nedd4 family interacting protein 1.	0.871
NEDD4L	NDFIP2	ENSODEP00000025266	ENSODEP00000007385	NEDD4 like E3 ubiquitin protein ligase.	Nedd4 family interacting protein 2.	0.901
NEDD4L	NEDD4	ENSODEP00000025266	ENSODEP00000009108	NEDD4 like E3 ubiquitin protein ligase.	NEDD4 E3 ubiquitin protein ligase.	0.923