IGSF10 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IGSF10

Immunoglobulin superfamily member 10. (2586 aa)

Predicted Functional Partners:

ENSODEP00000025351

0.726

NTNG1

0.718

PTK7

0.672

TRAF7

0.634

EGFLAM

0.609

Tonsl

0.591

PIDD1

0.573

FCER1G

0.554

F12

0.529

HABP2

0.529

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGFLAM	ENSODEP00000025351	ENSODEP00000023779	ENSODEP00000025351	EGF like, fibronectin type III and laminin G domains.	annotation not available	0.961
EGFLAM	F12	ENSODEP00000023779	ENSODEP00000010510	EGF like, fibronectin type III and laminin G domains.	Coagulation factor XII.	0.874
EGFLAM	HABP2	ENSODEP00000023779	ENSODEP00000012118	EGF like, fibronectin type III and laminin G domains.	Hyaluronan binding protein 2.	0.874
EGFLAM	IGSF10	ENSODEP00000023779	ENSODEP00000001943	EGF like, fibronectin type III and laminin G domains.	Immunoglobulin superfamily member 10.	0.609
EGFLAM	NTNG1	ENSODEP00000023779	ENSODEP00000007293	EGF like, fibronectin type III and laminin G domains.	Netrin G1.	0.581
EGFLAM	PIDD1	ENSODEP00000023779	ENSODEP00000020467	EGF like, fibronectin type III and laminin G domains.	P53-induced death domain protein 1.	0.760
EGFLAM	PTK7	ENSODEP00000023779	ENSODEP00000021359	EGF like, fibronectin type III and laminin G domains.	Protein tyrosine kinase 7 (inactive).	0.864
EGFLAM	TRAF7	ENSODEP00000023779	ENSODEP00000018251	EGF like, fibronectin type III and laminin G domains.	TNF receptor associated factor 7.	0.492
EGFLAM	Tonsl	ENSODEP00000023779	ENSODEP00000017310	EGF like, fibronectin type III and laminin G domains.	Tonsoku like, DNA repair protein.	0.545
ENSODEP00000025351	EGFLAM	ENSODEP00000025351	ENSODEP00000023779	annotation not available	EGF like, fibronectin type III and laminin G domains.	0.961
ENSODEP00000025351	F12	ENSODEP00000025351	ENSODEP00000010510	annotation not available	Coagulation factor XII.	0.909
ENSODEP00000025351	FCER1G	ENSODEP00000025351	ENSODEP00000010018	annotation not available	Fc fragment of IgE receptor Ig.	0.583
ENSODEP00000025351	HABP2	ENSODEP00000025351	ENSODEP00000012118	annotation not available	Hyaluronan binding protein 2.	0.909
ENSODEP00000025351	IGSF10	ENSODEP00000025351	ENSODEP00000001943	annotation not available	Immunoglobulin superfamily member 10.	0.726
ENSODEP00000025351	NTNG1	ENSODEP00000025351	ENSODEP00000007293	annotation not available	Netrin G1.	0.931
ENSODEP00000025351	PIDD1	ENSODEP00000025351	ENSODEP00000020467	annotation not available	P53-induced death domain protein 1.	0.962
ENSODEP00000025351	PTK7	ENSODEP00000025351	ENSODEP00000021359	annotation not available	Protein tyrosine kinase 7 (inactive).	0.899
ENSODEP00000025351	TRAF7	ENSODEP00000025351	ENSODEP00000018251	annotation not available	TNF receptor associated factor 7.	0.670
ENSODEP00000025351	Tonsl	ENSODEP00000025351	ENSODEP00000017310	annotation not available	Tonsoku like, DNA repair protein.	0.949
F12	EGFLAM	ENSODEP00000010510	ENSODEP00000023779	Coagulation factor XII.	EGF like, fibronectin type III and laminin G domains.	0.874