Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001944annotation not available (274 aa)    
Predicted Functional Partners:
PSMD8
Proteasome 26S subunit, non-ATPase 8.
   
 0.982
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.981
ADRM1
Adhesion regulating molecule 1.
    
 0.979
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.972
ACTR5
Actin related protein 5.
    
 0.971
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.970
ACTR8
Actin related protein 8.
    
 0.969
TFPT
TCF3 fusion partner.
    
 0.967
PSMD2
Proteasome 26S subunit, non-ATPase 2.
   
 0.965
PSMB1
Proteasome 20S subunit beta 1.
   
 0.964
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.