STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OXA1LOXA1L mitochondrial inner membrane protein. (436 aa)    
Predicted Functional Partners:
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.983
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.983
MRPL17
Mitochondrial ribosomal protein L17.
  
 
 0.983
MRPL12
Mitochondrial ribosomal protein L12.
   
 
 0.981
MRPS9
Mitochondrial ribosomal protein S9.
  
   0.980
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.976
MRPL27
Mitochondrial ribosomal protein L27.
  
   0.971
MRPL45
Mitochondrial ribosomal protein L45.
   
 
 0.969
Mrpl2
annotation not available
   
 
 0.968
MRPL58
Mitochondrial ribosomal protein L58.
  
 
 0.966
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.