Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OXA1LOXA1L mitochondrial inner membrane protein. (436 aa)    
Predicted Functional Partners:
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 0.974
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.949
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.946
Tufm
Tu translation elongation factor, mitochondrial.
   
 0.941
MRPL17
Mitochondrial ribosomal protein L17.
  
 
 0.934
MRPL45
Mitochondrial ribosomal protein L45.
   
 
 0.927
MRPS9
Mitochondrial ribosomal protein S9.
  
   0.925
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.924
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.924
MRPL12
Mitochondrial ribosomal protein L12.
   
 
 0.923
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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