STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP2R1AProtein phosphatase 2 scaffold subunit Aalpha. (589 aa)    
Predicted Functional Partners:
PPP2R5A
Protein phosphatase 2 regulatory subunit B'alpha.
   
 0.997
PPP2R5B
Protein phosphatase 2 regulatory subunit B'beta.
   
 0.997
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
   
 0.996
PPP2R5E
Protein phosphatase 2 regulatory subunit B'epsilon.
   
 0.996
PPP2R2B
Protein phosphatase 2 regulatory subunit Bbeta.
   
 0.995
PPP2R2C
Protein phosphatase 2 regulatory subunit Bgamma.
    
 0.995
PPP2R3A
Protein phosphatase 2 regulatory subunit B''alpha.
    
 0.993
ENSODEP00000021868
annotation not available
   
 0.992
PPP2R2A
Protein phosphatase 2 regulatory subunit Balpha.
   
 0.990
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
 0.988
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.