STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001959annotation not available (302 aa)    
Predicted Functional Partners:
CTSV
Cathepsin V.
   
 0.975
CST3
Cystatin C.
   
 0.960
CD74
CD74 molecule.
   
 0.959
CTSH
Cathepsin H.
   
 0.957
CTSB
Cathepsin B.
   
 0.938
CTSA
Cathepsin A.
   
 0.910
CTSO
Cathepsin O.
  
 
0.908
CTSF
Cathepsin F.
   
 0.904
BCL2
BCL2 apoptosis regulator.
     
 0.902
CTSE
Cathepsin E.
   
 0.902
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.