STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STX3Syntaxin 3. (289 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.999
ENSODEP00000024482
annotation not available
    
 0.999
STXBP1
Syntaxin binding protein 1.
   
 0.998
VAMP8
Vesicle associated membrane protein 8.
    
 0.996
STX4
Syntaxin 4.
  
 
0.996
ENSODEP00000001781
annotation not available
    
 0.995
STX5
Syntaxin 5.
    
 0.995
VAMP1
Vesicle associated membrane protein 1.
    
 0.995
STXBP2
Syntaxin binding protein 2.
   
 0.995
ENSODEP00000017069
annotation not available
    
 0.995
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.