STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001973annotation not available (340 aa)    
Predicted Functional Partners:
SH3D19
SH3 domain containing 19.
    
   0.915
SMAP2
Small ArfGAP2.
    
 
 0.837
WAS
WASP actin nucleation promoting factor.
    
 
 0.812
WASL
WASP like actin nucleation promoting factor.
    
 
 0.812
VPS37B
VPS37B subunit of ESCRT-I.
    
   0.804
SMAP1
Small ArfGAP 1.
    
 
 0.790
MVK
Mevalonate kinase.
    
   0.776
ENSODEP00000012450
annotation not available
   
 
 0.740
DBNL
Drebrin like.
   
 
 0.740
ADAP1
ArfGAP with dual PH domains 1.
    
 
 0.687
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.