STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000001973annotation not available (340 aa)    
Predicted Functional Partners:
WAS
WASP actin nucleation promoting factor.
    
 
 0.925
WASL
WASP like actin nucleation promoting factor.
    
 
 0.925
MVK
Mevalonate kinase.
    
   0.918
SH3D19
SH3 domain containing 19.
   
   0.868
GFPT2
Glutamine-fructose-6-phosphate transaminase 2.
   
    0.751
GFPT1
Glutamine--fructose-6-phosphate transaminase 1.
   
    0.751
SMAP2
Small ArfGAP2.
    
 
 0.669
ENSODEP00000025153
annotation not available
    
  0.669
SMAP1
Small ArfGAP 1.
    
 
 0.630
VPS37B
VPS37B subunit of ESCRT-I.
    
   0.546
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.