STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101566538annotation not available (113 aa)    
Predicted Functional Partners:
CX3CR1
C-X3-C motif chemokine receptor 1.
    
 0.983
CXCR3
C-X-C motif chemokine receptor 3.
   
 0.979
CCR7
C-C motif chemokine receptor 7.
    
 0.978
CCR9
C-C motif chemokine receptor 9.
   
 0.974
CCL5
C-C motif chemokine ligand 5.
   
 0.974
CCR10
C-C motif chemokine receptor 10.
    
 0.974
CXCR5
C-X-C motif chemokine receptor 5.
   
 0.973
CCR4
C-C motif chemokine receptor 4.
    
 0.969
CXCL10
C-X-C motif chemokine ligand 10.
   
 0.966
CXCL9
C-X-C motif chemokine ligand 9.
   
 0.965
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.