ENSODEP00000001977 protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSODEP00000001977

annotation not available (291 aa)

Predicted Functional Partners:

ARID4B

0.985

Arid4a

0.984

ENSODEP00000020185

0.984

SIN3A

0.984

SIN3B

0.982

SUDS3

0.978

SAP30

0.961

ENSODEP00000006233

0.959

ENSODEP00000007947

0.959

WDR26

0.953

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4B	Arid4a	ENSODEP00000007199	ENSODEP00000019395	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.765
ARID4B	ENSODEP00000001977	ENSODEP00000007199	ENSODEP00000001977	AT-rich interaction domain 4B.	annotation not available	0.985
ARID4B	ENSODEP00000006233	ENSODEP00000007199	ENSODEP00000006233	AT-rich interaction domain 4B.	annotation not available	0.983
ARID4B	ENSODEP00000007947	ENSODEP00000007199	ENSODEP00000007947	AT-rich interaction domain 4B.	annotation not available	0.983
ARID4B	ENSODEP00000020185	ENSODEP00000007199	ENSODEP00000020185	AT-rich interaction domain 4B.	annotation not available	0.765
ARID4B	SAP30	ENSODEP00000007199	ENSODEP00000015726	AT-rich interaction domain 4B.	Sin3A associated protein 30.	0.999
ARID4B	SIN3A	ENSODEP00000007199	ENSODEP00000020215	AT-rich interaction domain 4B.	SIN3 transcription regulator family member A.	0.997
ARID4B	SIN3B	ENSODEP00000007199	ENSODEP00000002266	AT-rich interaction domain 4B.	SIN3 transcription regulator family member B.	0.996
ARID4B	SUDS3	ENSODEP00000007199	ENSODEP00000009841	AT-rich interaction domain 4B.	SDS3 homolog, SIN3A corepressor complex component.	0.989
ARID4B	WDR26	ENSODEP00000007199	ENSODEP00000019826	AT-rich interaction domain 4B.	WD repeat domain 26.	0.739
Arid4a	ARID4B	ENSODEP00000019395	ENSODEP00000007199	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.765
Arid4a	ENSODEP00000001977	ENSODEP00000019395	ENSODEP00000001977	AT-rich interaction domain 4A.	annotation not available	0.984
Arid4a	ENSODEP00000006233	ENSODEP00000019395	ENSODEP00000006233	AT-rich interaction domain 4A.	annotation not available	0.983
Arid4a	ENSODEP00000007947	ENSODEP00000019395	ENSODEP00000007947	AT-rich interaction domain 4A.	annotation not available	0.983
Arid4a	ENSODEP00000020185	ENSODEP00000019395	ENSODEP00000020185	AT-rich interaction domain 4A.	annotation not available	0.975
Arid4a	SAP30	ENSODEP00000019395	ENSODEP00000015726	AT-rich interaction domain 4A.	Sin3A associated protein 30.	0.998
Arid4a	SIN3A	ENSODEP00000019395	ENSODEP00000020215	AT-rich interaction domain 4A.	SIN3 transcription regulator family member A.	0.996
Arid4a	SIN3B	ENSODEP00000019395	ENSODEP00000002266	AT-rich interaction domain 4A.	SIN3 transcription regulator family member B.	0.996
Arid4a	SUDS3	ENSODEP00000019395	ENSODEP00000009841	AT-rich interaction domain 4A.	SDS3 homolog, SIN3A corepressor complex component.	0.988
Arid4a	WDR26	ENSODEP00000019395	ENSODEP00000019826	AT-rich interaction domain 4A.	WD repeat domain 26.	0.739