STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGCLL13-hydroxymethyl-3-methylglutaryl-CoA lyase like 1. (307 aa)    
Predicted Functional Partners:
OXCT1
3-oxoacid CoA-transferase 1.
  
 
 0.962
MCCC2
methylcrotonoyl-CoA carboxylase 2.
 
 0.949
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 
 0.944
ACAT1
acetyl-CoA acetyltransferase 1.
  
 
 0.943
AUH
AU RNA binding methylglutaconyl-CoA hydratase.
  
 
 0.940
ECHDC2
enoyl-CoA hydratase domain containing 2.
  
 
 0.940
BCAT1
Branched chain amino acid transaminase 1.
  
 0.939
BCAT2
Branched chain amino acid transaminase 2.
  
 0.939
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
    
 0.936
ENSODEP00000005858
annotation not available
  
 
 0.933
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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