STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLI1GLI family zinc finger 1. (1106 aa)    
Predicted Functional Partners:
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.999
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.997
GLI2
GLI family zinc finger 2.
   
 0.993
SPOPL
Speckle type BTB/POZ protein like.
   
 0.991
FBXW11
F-box and WD repeat domain containing 11.
    
 0.990
GLI3
GLI family zinc finger 3.
   
0.990
CUL3
Cullin 3.
    
 0.987
CUL1
Cullin 1.
    
 0.987
ENSODEP00000009338
annotation not available
    
 0.982
KIF3A
Kinesin family member 3A.
    
 0.982
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.