Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R3FProtein phosphatase 1 regulatory subunit 3F. (796 aa)    
Predicted Functional Partners:
GYS2
Glycogen synthase 2.
   
 0.988
GYS1
Glycogen synthase 1.
   
 0.988
ENSODEP00000012875
annotation not available
    
 0.986
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
     
0.981
PHKA1
Phosphorylase kinase regulatory subunit alpha 1.
     
 0.960
ENSODEP00000005621
annotation not available
     
 0.960
PHKB
Phosphorylase kinase regulatory subunit beta.
     
 0.960
PHKG1
Phosphorylase kinase catalytic subunit gamma 1.
     
 0.960
CALML4
Calmodulin like 4.
     
  0.960
PHKG2
Phosphorylase kinase catalytic subunit gamma 2.
     
 0.960
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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