STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MLYCDmalonyl-CoA decarboxylase. (492 aa)    
Predicted Functional Partners:
ACSF3
acyl-CoA synthetase family member 3.
    
 0.979
ACSS1
acyl-CoA synthetase short chain family member 1.
    
 0.976
MCAT
malonyl-CoA-acyl carrier protein transacylase.
  
 
 0.975
ENSODEP00000018371
annotation not available
    
 0.973
ACACA
acetyl-CoA carboxylase alpha.
    
 0.972
ACAT1
acetyl-CoA acetyltransferase 1.
  
 
 0.969
ACAT2
acetyl-CoA acetyltransferase 2.
  
 
 0.968
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
   
 
 0.964
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
     
 0.962
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
     
 0.961
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.