STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STXBP5Syntaxin binding protein 5. (1152 aa)    
Predicted Functional Partners:
STX1A
Syntaxin 1A.
   
 0.977
SNAP25
Synaptosome associated protein 25.
   
 0.976
STX3
Syntaxin 3.
    
 0.971
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.969
STX11
Syntaxin 11.
    
 0.959
STX1B
Syntaxin 1B.
   
 0.957
STX12
Syntaxin 12.
    
 0.946
SNAP29
Synaptosome associated protein 29.
    
 0.946
STX4
Syntaxin 4.
    
 0.945
STX19
Syntaxin 19.
    
 0.944
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.