STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STXBP5Syntaxin binding protein 5. (1152 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.992
STX11
Syntaxin 11.
    
 0.984
STX4
Syntaxin 4.
    
 0.983
STX3
Syntaxin 3.
    
 0.982
STX2
Syntaxin 2.
    
 0.981
ENSODEP00000001581
annotation not available
   
 0.980
SNAP29
Synaptosome associated protein 29.
    
 0.980
EXOC4
Exocyst complex component 4.
   
 0.979
STX6
Syntaxin 6.
    
 0.977
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.977
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.