STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN19Claudin 19. (224 aa)    
Predicted Functional Partners:
CLDN16
Claudin 16.
   
 0.996
TJP1
Tight junction protein 1.
   
 0.986
CLDN12
Claudin 12.
     
 0.983
TJP3
Tight junction protein 3.
   
 0.978
CLDN23
Claudin 23.
   
 
 0.970
CLDN14
Claudin 14.
     
 0.966
CLDN9
Claudin 9.
   
 
 0.964
CLDN3
Claudin 3.
   
  0.964
CLDN4
Claudin 4.
   
  0.964
CLDN18
Claudin 18.
    
 0.963
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.