Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPTDermatopontin. (201 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
  
 0.719
DCN
Decorin.
   
  
 0.695
LOX
Lysyl oxidase.
   
 
 0.640
ECM2
Extracellular matrix protein 2.
   
  
 0.623
MFAP4
Microfibril associated protein 4.
   
  
 0.620
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
  
 0.601
FMOD
Fibromodulin.
   
  
 0.591
POSTN
Periostin.
   
  
 0.582
OGN
Osteoglycin.
   
  
 0.575
ENSODEP00000025495
annotation not available
      
 0.553
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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