STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000002015annotation not available (419 aa)    
Predicted Functional Partners:
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.967
LOC101583547
Eukaryotic translation initiation factor 3 subunit C.
   
 0.960
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
   
 0.952
EIF3A
Eukaryotic translation initiation factor 3 subunit A.
   
 0.952
ENSODEP00000011202
annotation not available
   
 
 0.946
EIF3D
Eukaryotic translation initiation factor 3 subunit D.
    
 0.935
EIF3F
Eukaryotic translation initiation factor 3 subunit F.
  
 0.929
ENSODEP00000005551
annotation not available
   
 0.925
ENSODEP00000016343
annotation not available
   
 0.925
ENSODEP00000019092
annotation not available
   
 0.925
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.