DUS4L protein (Octodon degus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

DUS4L

Dihydrouridine synthase 4 like. (317 aa)

Predicted Functional Partners:

TRMT11

0.830

EPRS1

0.768

ENSODEP00000002733

0.763

ENSODEP00000005324

0.763

ADH7

0.763

ENSODEP00000006517

0.763

ENSODEP00000006576

0.763

ENSODEP00000011531

0.763

TRMT2A

0.745

PUS3

0.734

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADH7	DUS4L	ENSODEP00000005355	ENSODEP00000002020	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	Dihydrouridine synthase 4 like.	0.763
ADH7	ENSODEP00000002733	ENSODEP00000005355	ENSODEP00000002733	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	annotation not available	0.519
ADH7	ENSODEP00000005324	ENSODEP00000005355	ENSODEP00000005324	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	annotation not available	0.619
ADH7	ENSODEP00000006517	ENSODEP00000005355	ENSODEP00000006517	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	annotation not available	0.619
ADH7	ENSODEP00000006576	ENSODEP00000005355	ENSODEP00000006576	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	annotation not available	0.619
ADH7	ENSODEP00000011531	ENSODEP00000005355	ENSODEP00000011531	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	annotation not available	0.519
DUS4L	ADH7	ENSODEP00000002020	ENSODEP00000005355	Dihydrouridine synthase 4 like.	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	0.763
DUS4L	ENSODEP00000002733	ENSODEP00000002020	ENSODEP00000002733	Dihydrouridine synthase 4 like.	annotation not available	0.763
DUS4L	ENSODEP00000005324	ENSODEP00000002020	ENSODEP00000005324	Dihydrouridine synthase 4 like.	annotation not available	0.763
DUS4L	ENSODEP00000006517	ENSODEP00000002020	ENSODEP00000006517	Dihydrouridine synthase 4 like.	annotation not available	0.763
DUS4L	ENSODEP00000006576	ENSODEP00000002020	ENSODEP00000006576	Dihydrouridine synthase 4 like.	annotation not available	0.763
DUS4L	ENSODEP00000011531	ENSODEP00000002020	ENSODEP00000011531	Dihydrouridine synthase 4 like.	annotation not available	0.763
DUS4L	EPRS1	ENSODEP00000002020	ENSODEP00000020284	Dihydrouridine synthase 4 like.	glutamyl-prolyl-tRNA synthetase 1.	0.768
DUS4L	PUS3	ENSODEP00000002020	ENSODEP00000005678	Dihydrouridine synthase 4 like.	Pseudouridine synthase 3.	0.734
DUS4L	TRMT11	ENSODEP00000002020	ENSODEP00000007443	Dihydrouridine synthase 4 like.	tRNA methyltransferase 11 homolog.	0.830
DUS4L	TRMT2A	ENSODEP00000002020	ENSODEP00000021828	Dihydrouridine synthase 4 like.	tRNA methyltransferase 2 homolog A.	0.745
ENSODEP00000002733	ADH7	ENSODEP00000002733	ENSODEP00000005355	annotation not available	Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.	0.519
ENSODEP00000002733	DUS4L	ENSODEP00000002733	ENSODEP00000002020	annotation not available	Dihydrouridine synthase 4 like.	0.763
ENSODEP00000002733	ENSODEP00000005324	ENSODEP00000002733	ENSODEP00000005324	annotation not available	annotation not available	0.799
ENSODEP00000002733	ENSODEP00000006517	ENSODEP00000002733	ENSODEP00000006517	annotation not available	annotation not available	0.799