STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACAP2ArfGAP with coiled-coil, ankyrin repeat and PH domains 2. (770 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
    
 
 0.961
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
0.919
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
0.919
IFT27
Intraflagellar transport 27.
    
 
 0.841
ARF6
ADP ribosylation factor 6.
    
 0.835
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
0.833
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
    0.830
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.815
ENSODEP00000022427
annotation not available
    
0.815
SMAP2
Small ArfGAP2.
    
0.805
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.