STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKIP1A-kinase interacting protein 1. (212 aa)    
Predicted Functional Partners:
POC1A
POC1 centriolar protein A.
    
   0.829
ENSODEP00000024498
annotation not available
    
 
 0.828
POC1B
POC1 centriolar protein B.
    
   0.784
DHRS7C
Dehydrogenase/reductase 7C.
      
 0.763
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 
 0.762
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
    
 
 0.762
REL
REL proto-oncogene, NF-kB subunit.
    
 
 0.722
RELB
RELB proto-oncogene, NF-kB subunit.
    
 
 0.689
IDO1
Indoleamine 2,3-dioxygenase 1.
      
 0.600
OSMR
Oncostatin M receptor.
      
 0.590
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.