STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000002147annotation not available (502 aa)    
Predicted Functional Partners:
HOMER1
Homer scaffold protein 1.
    
 0.988
ENSODEP00000020166
annotation not available
    
 0.978
HOMER2
Homer scaffold protein 2.
    
 0.947
ENSODEP00000005855
annotation not available
    
 0.940
GNAI1
G protein subunit alpha i1.
    
 0.940
ENSODEP00000025889
annotation not available
    
 0.940
GNA11
G protein subunit alpha 11.
    
 0.939
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.932
GABBR1
Gamma-aminobutyric acid type B receptor subunit 1.
   
 0.930
ENSODEP00000023283
annotation not available
   
 0.929
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.