STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLIFCobalamin binding intrinsic factor. (417 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.996
CDCP2
CUB domain containing protein 2.
    
 0.979
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.963
ATP4B
ATPase H+/K+ transporting subunit beta.
   
  
 0.860
TCN2
Transcobalamin 2.
     
0.844
AMN
Amnion associated transmembrane protein.
     
 0.785
RNF2
Ring finger protein 2.
    
  0.781
RING1
Ring finger protein 1.
    
  0.781
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
  0.775
MED19
Mediator complex subunit 19.
     
 0.770
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.