Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABHD4Abhydrolase domain containing 4. (355 aa)    
Predicted Functional Partners:
ENSODEP00000020000
annotation not available
    
 0.979
PNPLA3
Patatin like phospholipase domain containing 3.
    
 0.960
PNPLA5
Patatin like phospholipase domain containing 5.
    
 0.960
PLIN2
Perilipin 2.
   
 0.913
PLIN3
Perilipin 3.
   
 0.913
PLIN1
Perilipin 1.
   
 0.913
TAZ
Tafazzin.
    
 
 0.860
ENSODEP00000000105
annotation not available
    
 0.843
Crls1
annotation not available
    
 0.843
HDHD5
Haloacid dehalogenase like hydrolase domain containing 5.
    
 0.815
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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