STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000002201annotation not available (124 aa)    
Predicted Functional Partners:
CLCN5
Chloride voltage-gated channel 5.
    
 
 0.912
ENSODEP00000002386
annotation not available
   
   0.852
ENSODEP00000004933
annotation not available
   
   0.852
ENSODEP00000015519
annotation not available
   
   0.852
CLCN4
Chloride voltage-gated channel 4.
    
 
 0.846
CLCN3
Chloride voltage-gated channel 3.
    
 
 0.823
WWC3
WWC family member 3.
    
 
 0.734
ENSODEP00000007324
annotation not available
    
 
 0.680
HEATR3
HEAT repeat containing 3.
    
   0.598
ENSODEP00000024181
annotation not available
      
 0.580
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.