Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRIP2Glutamate receptor interacting protein 2. (1033 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.883
PICK1
Protein interacting with PRKCA 1.
    
 0.883
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.871
SUOX
Sulfite oxidase.
     
  0.869
PPFIA1
PTPRF interacting protein alpha 1.
    
 0.850
IFT57
Intraflagellar transport 57.
    
 0.817
IFT88
Intraflagellar transport 88.
    
 0.817
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.812
IFT172
Intraflagellar transport 172.
    
 0.807
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.786
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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