STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIVEP3HIVEP zinc finger 3. (2381 aa)    
Predicted Functional Partners:
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.870
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.846
SMAD4
SMAD family member 4.
   
 0.842
ENSODEP00000025351
annotation not available
    
 0.797
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.795
ARID4B
AT-rich interaction domain 4B.
    
 0.790
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.773
ENSODEP00000020083
annotation not available
    
 0.746
ENSODEP00000021454
annotation not available
    
 0.746
ENSODEP00000017429
annotation not available
    
 0.720
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.