STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLB1L3Galactosidase beta 1 like 3. (622 aa)    
Predicted Functional Partners:
CTSA
Cathepsin A.
   
 0.927
CXXC1
CXXC finger protein 1.
    
 0.909
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.901
GUSB
Glucuronidase beta.
   
 0.885
MANBA
Mannosidase beta.
 
 
 0.878
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.878
NEU1
Neuraminidase 1.
  
 0.861
ENSODEP00000012794
annotation not available
   
 0.854
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.848
ENSODEP00000019711
annotation not available
    
 0.848
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.