STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM150CTransmembrane protein 150C. (249 aa)    
Predicted Functional Partners:
ENSODEP00000002225
annotation not available
      
 0.621
ENSODEP00000002379
annotation not available
      
 0.614
TMEM120B
Transmembrane protein 120B.
      
 0.590
TMEM120A
Transmembrane protein 120A.
      
 0.590
CNTLN
Centlein.
      
 0.586
KLHL18
Kelch like family member 18.
      
 0.585
TMEM63C
Transmembrane protein 63C.
      
 0.585
TRPV4
Transient receptor potential cation channel subfamily V member 4.
      
 0.583
ENSODEP00000010884
annotation not available
      
 0.581
ENSODEP00000011474
annotation not available
      
 0.581
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.