STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC15Zinc finger DHHC-type containing 15. (302 aa)    
Predicted Functional Partners:
ENSODEP00000011938
annotation not available
   
 0.955
Ska1
Spindle and kinetochore associated complex subunit 1.
   
 0.955
ENSODEP00000018061
annotation not available
   
 0.952
ENSODEP00000026017
annotation not available
   
 0.952
NDC80
NDC80 kinetochore complex component.
   
 
 0.887
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.855
NUP133
Nucleoporin 133.
    
 0.852
CLSPN
Claspin.
   
 
 0.828
TIMELESS
Timeless circadian regulator.
    
 
 0.807
RPA3
Replication protein A3.
   
   0.799
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.