STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000002681annotation not available (211 aa)    
Predicted Functional Partners:
TKT
Transketolase.
  
 0.965
XYLB
Xylulokinase.
   
 0.949
PGD
Phosphogluconate dehydrogenase.
   
 0.948
RPIA
Ribose 5-phosphate isomerase A.
  
 0.944
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.939
TKTL1
Transketolase like 1.
  
 0.933
TKTL2
Transketolase like 2.
  
 0.933
RBM45
RNA-binding protein 45.
   
 0.921
ENSODEP00000007335
annotation not available
  
 0.900
ENSODEP00000020332
annotation not available
  
 0.900
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.