Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANGPT1 | ANGPT2 | ENSODEP00000001429 | ENSODEP00000000818 | Angiopoietin 1. | Angiopoietin 2. | 0.895 |
ANGPT1 | ENSODEP00000000264 | ENSODEP00000001429 | ENSODEP00000000264 | Angiopoietin 1. | annotation not available | 0.854 |
ANGPT1 | PECAM1 | ENSODEP00000001429 | ENSODEP00000010217 | Angiopoietin 1. | Platelet and endothelial cell adhesion molecule 1. | 0.453 |
ANGPT1 | TIE1 | ENSODEP00000001429 | ENSODEP00000002709 | Angiopoietin 1. | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.978 |
ANGPT1 | VEGFB | ENSODEP00000001429 | ENSODEP00000022618 | Angiopoietin 1. | Vascular endothelial growth factor B. | 0.412 |
ANGPT2 | ANGPT1 | ENSODEP00000000818 | ENSODEP00000001429 | Angiopoietin 2. | Angiopoietin 1. | 0.895 |
ANGPT2 | ENSODEP00000000264 | ENSODEP00000000818 | ENSODEP00000000264 | Angiopoietin 2. | annotation not available | 0.886 |
ANGPT2 | PECAM1 | ENSODEP00000000818 | ENSODEP00000010217 | Angiopoietin 2. | Platelet and endothelial cell adhesion molecule 1. | 0.445 |
ANGPT2 | TIE1 | ENSODEP00000000818 | ENSODEP00000002709 | Angiopoietin 2. | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.978 |
ANGPTL7 | TIE1 | ENSODEP00000019610 | ENSODEP00000002709 | Angiopoietin like 7. | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.956 |
CSF1 | KITLG | ENSODEP00000010619 | ENSODEP00000011121 | Colony stimulating factor 1. | KIT ligand. | 0.414 |
CSF1 | TIE1 | ENSODEP00000010619 | ENSODEP00000002709 | Colony stimulating factor 1. | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.925 |
ENSODEP00000000264 | ANGPT1 | ENSODEP00000000264 | ENSODEP00000001429 | annotation not available | Angiopoietin 1. | 0.854 |
ENSODEP00000000264 | ANGPT2 | ENSODEP00000000264 | ENSODEP00000000818 | annotation not available | Angiopoietin 2. | 0.886 |
ENSODEP00000000264 | TIE1 | ENSODEP00000000264 | ENSODEP00000002709 | annotation not available | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.978 |
ENSODEP00000023051 | PDGFC | ENSODEP00000023051 | ENSODEP00000005246 | annotation not available | Platelet derived growth factor C. | 0.839 |
ENSODEP00000023051 | PECAM1 | ENSODEP00000023051 | ENSODEP00000010217 | annotation not available | Platelet and endothelial cell adhesion molecule 1. | 0.582 |
ENSODEP00000023051 | TIE1 | ENSODEP00000023051 | ENSODEP00000002709 | annotation not available | Tyrosine kinase with immunoglobulin like and EGF like domains 1. | 0.922 |
ENSODEP00000023051 | VEGFB | ENSODEP00000023051 | ENSODEP00000022618 | annotation not available | Vascular endothelial growth factor B. | 0.830 |
KITLG | CSF1 | ENSODEP00000011121 | ENSODEP00000010619 | KIT ligand. | Colony stimulating factor 1. | 0.414 |
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