STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP2poly(ADP-ribose) polymerase 2. (558 aa)    
Predicted Functional Partners:
PARG
poly(ADP-ribose) glycohydrolase.
    
 0.976
HPF1
Histone PARylation factor 1.
    
 
 0.969
ENSODEP00000022459
annotation not available
    
 0.966
CASP7
Caspase 7.
    
 0.965
PARP1
poly(ADP-ribose) polymerase 1.
  
0.957
CHD1L
Chromodomain helicase DNA binding protein 1 like.
   
 0.954
XRCC6
X-ray repair cross complementing 6.
   
 
 0.951
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.944
POLB
DNA polymerase beta.
    
 0.944
ENSODEP00000007021
annotation not available
    
 0.936
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.