Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BNIP1BCL2 interacting protein 1. (228 aa)    
Predicted Functional Partners:
USE1
Unconventional SNARE in the ER 1.
    
 0.996
STX18
Syntaxin 18.
    
 0.996
ENSODEP00000002206
annotation not available
    
 0.971
ENSODEP00000008684
annotation not available
    
 0.971
NAPA
NSF attachment protein alpha.
    
  0.963
NAPB
NSF attachment protein beta.
    
  0.963
ENSODEP00000001215
annotation not available
    
  0.942
SNAP29
Synaptosome associated protein 29.
    
  0.924
SEC22A
SEC22 homolog A, vesicle trafficking protein.
    
 0.921
SEC22C
SEC22 homolog C, vesicle trafficking protein.
    
 0.921
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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